Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015937736.1_cds_XP_016482911.1_74086
CDS Infomation

[gene=LOC107803657] [db_xref=GeneID:107803657] [protein=putative nuclear RNA export factor SDE5] [protein_id=XP_016482911.1] [location=complement(join(31718..31843,32880..32947,33023..33123,33217..33284,33811..33867,34039..34124,34693..34943,35062..35132,36084..36161,37047..37072,37501..38110))] [gbkey=CDS]
Sequence

ATGAAGATGGAAGCACCTCCAACAGTTTTGTTTACTGATGATGATAGAAAGAACCTGGAG
CAGTTGCTTGATGTCTTTGGACGTGTTGTCTCTCTTGATGACATTGCTGCAGCTTATTGT
AAAGCAGGTCGGGATCCAACTATTGCGGGTGATATACTCGGAGATCTGCAAGCTAGCACC
TATATAATTACTACCTCTGCATCAGAAGAAAAAATAGAGGATTCCTTGACACTGACTTCT
GAATCTCAATTTGAGGAAGTAGGAGATTCTGTGACATTAACTTCTGAATCTGCATCCGAG
ATTTATGCCAAGAGAGCTGGTCCCAGTTCATCAAAGCAAAAAAAGTTATCAGTGTCTATG
GGGACTGTCTCAAGCATGATCCCAAGAGACTATGTGACAAATAGGCCACTCATTCCAGAA
ACTTCTACGAGAATCAAGCCACTGAAATTAACTGTGGATGATTTTTTTACCCCAGAGATA
AGGGATGAGAAAGCTCCATTAGGTGCTGCAGCTATGAGTGAAACCCTGCCAGGCAGTGTT
GAGGAGTTCCTCTTCAAAATGCTCGGAGATGGATTCTCTCTTGACATGAGTGTAATTGAA
GATGTTGTGGGCCAGTGCGGCTATGATCTAAATAAGAGTATGGATAAGCTGCTAGATTTG
TCAGCATCAACTTTGGGAAAGAGTGATGATATTTTAGACATAGGTGTTCAGAAATCTGGG
GAGAGTCCAGATTTTGCATCAGTTGCATCGCAAGAGACACCTTCAATGCAAGATCCAACC
AGCCGTTCCAAAGCAAAGAATATGACTAAAAATGGGCTCAACTTATCTAAGAAGGAGAAG
GTCAGGTATGAGTTTCAGAAGGAAGTTCTACAGACGTTGTTTAATGTGCCTGCAAGACAT
GATGATGTGGATGTTGTGATTCGTCATGTGAGGGAAGTTGAAAAGTCTAGGCGATTAAGT
CAGTTTGTAGTGAAACCATTACAGGAGACTGTAGAACGCCAGATTCTTATCAGGACACCA
CAGAGTGATGCAAAAAATGGTGAGGAGAATGAAGAAAGCTACGAAGTTCTCCGAAAAGCT
GTAAAGGAGTATTGGCTTACAATGAAAGAGTACTATAAAGCAGCTGCTGAAGAATTTCAA
AAAGGAGATCATGTCAAGGCACGCAGATTCCTGGAAGAGGGAAACTTTTTCATGACAAAG
GCCCGAGAGACTGATGAACAATCCGCTCAAACGCTTCTTGAAAACAGTTACAACAAAGAA
ATTGTGACTGTCGATCTTCACGATTTCGAGCCAAAGGAAGCAGTGCGCTGTCTCAAAATT
CAGTTGACATCTCTTTGTGGCATCTCCTCTATTCAGTATCTCAAAATCGTAGTTGGGATC
ACCAATGAAGAAGCCAAAGGTCTTCGGAAGCGTGTGATAATCAAACTTTTGGAGAGGGCC
TCGATAGCATGGACGGAAGAAGATAATGGCAAAGCAATTGTGATAAAAGCAGATGAAATA
GATCCAAGGAAACTGACTTTTGCTAAAAAATCAACTGTCTGA

Peptide Sequence

PEP ID

XP_016482911.1
PEP Infomation

PREDICTED: putative nuclear RNA export factor SDE5 [Nicotiana tabacum]
Sequence

MKMEAPPTVLFTDDDRKNLEQLLDVFGRVVSLDDIAAAYCKAGRDPTIAGDILGDLQAST
YIITTSASEEKIEDSLTLTSESQFEEVGDSVTLTSESASEIYAKRAGPSSSKQKKLSVSM
GTVSSMIPRDYVTNRPLIPETSTRIKPLKLTVDDFFTPEIRDEKAPLGAAAMSETLPGSV
EEFLFKMLGDGFSLDMSVIEDVVGQCGYDLNKSMDKLLDLSASTLGKSDDILDIGVQKSG
ESPDFASVASQETPSMQDPTSRSKAKNMTKNGLNLSKKEKVRYEFQKEVLQTLFNVPARH
DDVDVVIRHVREVEKSRRLSQFVVKPLQETVERQILIRTPQSDAKNGEENEESYEVLRKA
VKEYWLTMKEYYKAAAEEFQKGDHVKARRFLEEGNFFMTKARETDEQSAQTLLENSYNKE
IVTVDLHDFEPKEAVRCLKIQLTSLCGISSIQYLKIVVGITNEEAKGLRKRVIIKLLERA
SIAWTEEDNGKAIVIKADEIDPRKLTFAKKSTV

Transcript Sequence

Gene sequence data has not been registered.